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Publication

2026 Publications

Murthy, N., Rai, P., D’Souza, L., & Priyadarshini, P. (2026). Unravelling the genomic and functional potential of bacteriophages against non-typhoidal Salmonella Enteritidis and Salmonella Typhimurium. Archives of Microbiology, 208(2), 101.

Unravelling the genomic and functional potential of bacteriophages against non-typhoidal Salmonella Enteritidis and Salmonella Typhimurium

2026

Kb, D. B., Boddupally, D., Malukani, K. K., Cg, G., Padhi, Y., Patel, H. K., & Chatterjee, S. (2026). Transcriptome Analysis Reveals Key Players in Plant Immunity Triggered by Diffusible Signal Factor (DSF), a Xanthomonas Secreted Quorum Sensing Molecule. Molecular Plant-Microbe Interactions, (ja).

Transcriptome Analysis Reveals Key Players in Plant Immunity Triggered by Diffusible Signal Factor (DSF), a Xanthomonas Secreted Quorum Sensing Molecule

2026

Dasgupta, M. G., Dharanishanthi, V., Agarwal, I., & Krutovsky, K. V. (2015). Development of genetic markers in Eucalyptus species by target enrichment and exome sequencing. PloS one, 10(1), e0116528.

Development of Genetic Markers in Eucalyptus Species by Target Enrichment and Exome Sequencing

2026

Vyas, B., & Mayilraj, S. Biodegradation of maneb, a Fungicide by a γ-proteobacterium Pseudomonas psychrotolerans Strain SDS18.

Biodegradation of maneb, a Fungicide by a γ-proteobacterium Pseudomonas psychrotolerans Strain SDS18

2026

Rajendran, L., Kavitha, R., Durgadevi, D., Kalaiselvan, S., Karthikeyan, G., Raguchander, T., & Jeevarathinam, V. Metagenomic insights into the interactions between Chaetomium, tomato and the Fusarium–Meloidogyne complex. Annals of Applied Biology.

Metagenomic insights into the interactions between Chaetomium, tomato and the Fusarium–Meloidogyne complex

2026

Kumari, K., Batra, S. D., Sikri, K., & Tyagi, J. S. (2026). Insights into the host response to ‘dormant’Mycobacterium tuberculosis utilizing ‘Vitamin C-induced dormant Mtb’THP-1 cell infection model. BMC Genomics.

Insights into the host response to ‘dormant’ Mycobacterium tuberculosis utilizing ‘Vitamin C-induced dormant Mtb’ THP-1 cell infection model

2026

Sujith, T. N., Archana, A., Anushree, N., & Shivaprasad, P. V. (2026). Unraveling functions of a novel miRNA-aquaporin module linked to rice domestication. Planta, 263(3), 73.

Unraveling functions of a novel miRNA-aquaporin module linked to rice domestication

2026

Sarkar, S., Sarkar, J., Yonzon, B. T., Limboo, S., & Roy, S. C. (2026). Revealing Genetic Diversity in the Rice Breeding Lines (Oryza sativa x O. rufipogon) Based on Whole Genome Sequencing Variants (SNPs/InDels).

Revealing Genetic Diversity in the Rice Breeding Lines (Oryza sativa x O. rufipogon) Based on Whole Genome Sequencing Variants (SNPs/InDels)

2026

Gurjar, M. S., Agarwal, S., Sharma, S., Tyagi, A., Basak, P., Saharan, M. S., & Aggarwal, R. (2026). Transcriptome analysis of Bipolaris sorokiniana-wheat reveals mechanisms of interaction. Physiological and Molecular Plant Pathology, 103181.

Transcriptome analysis of Bipolaris sorokiniana-wheat reveals mechanisms of interaction

2026

Patel, K., Gautam, M., & Gairola, S. (2026). Comparative whole blood late-stage transcriptomics of polysaccharide and conjugated meningococcal serogroup A vaccine reveals distinct and persistent immune signatures in murine model. Vaccine, 80, 128537.

Comparative whole blood late-stage transcriptomics of polysaccharide and conjugated meningococcal serogroup A vaccine reveals distinct and persistent immune signatures in murine model

2026

Satheesh, G., Asokan, A. K., Vijayakumar, G., Rajavelu, A., Rao, S. N., Sivakumar, K. C., & Jaleel, A. (2026). Early blood DNA methylation patterns associated with glycemic progression in a prospective Indian cohort. Clinical Epigenetics, 18(1), 64.

Early blood DNA methylation patterns associated with glycemic progression in a prospective Indian cohort

2026

Choudhary, A., Roy, A., Tandon, S., & Das, B. (2026). Autophagy-Associated Exosomal microRNAs in Triple-Negative Breast Cancer: A Discovery-Phase Study.

Autophagy-Associated Exosomal microRNAs in Triple-Negative Breast Cancer: A Discovery-Phase Study

2026

Darangwal, H., Vyas, B., Kumari, M., Bansal, O., Mayilraj, S., & Vemuluri, V. R. (2026). Taxonomic Description and Genomic Characterization of Saccharibacillus soli sp. nov., Isolated from Copper Mine Soil, Khetri, Rajasthan, India. Microorganisms, 14(5), 1150.

Taxonomic Description and Genomic Characterization of Saccharibacillus soli sp. nov., Isolated from Copper Mine Soil, Khetri, Rajasthan, India

2026

Soni, P., Pandey, A. K., Nayak, S. N., Pandey, M. K., Tolani, P., Pandey, S., … & Varshney, R. K. (2021). Global transcriptome profiling identified transcription factors, biological process, and associated pathways for pre-harvest aflatoxin contamination in groundnut. Journal of Fungi, 7(6), 413.

Global Transcriptome Profiling Identified Transcription Factors, Biological Process, and Associated Pathways for Pre-Harvest Aflatoxin Contamination in Groundnut

2026

Ahmad, N., Joji, R. M., Saeed, N. K., & Shahid, M. (2025). Genomic insights and molecular epidemiology through Whole Genome Sequencing in clinical Serratia marcescens ST-367 isolated from the Kingdom of Bahrain. Journal of Infection and Public Health, 103087.

Genomic insights and molecular epidemiology through Whole Genome Sequencing in clinical Serratia marcescens ST-367 isolated from the Kingdom of Bahrain

2025

Aquib Majeed, Tabraq Ali, Zahid Hussian and Sajad Hussain Parey

Book Chapter: Lepidoptera – Advances in Ecology, Conservation, and Taxonomy
Capter 2: Integrating Morphological, Molecular and Whole Genome (Mitogenomic) Approaches in Indian Lepidoptera

2025

Roy, C. B., Swathi, S. J., & Tom, A. DISEASE RESISTANCE SIGNALING IN HEVEA-CORYNESPORA INTERACTION DISCOVERED THROUGH TRANSCRIPTOME SEQUENCING-FROM RECOGNITION TO TRANSCRIPTIONAL REPROGRAMMING. Science, 38(1), 10-25.

Disease Resistance Signaling In Hevea-Corynespora Interaction Discovered Through Transcriptome Sequencing – From Recognition To Transcriptional Reprogramming

2025

Sasidharan, S. P., James, S., Balan, S., & Manakkadan, A. (2026). An optimized protocol for isolating Rhinosporidium seeberi sporangia from rhinosporidiosis tissue and extracting genomic DNA for next-generation sequencing. Molecular Biology Reports, 53(1), 117.

An optimized protocol for isolating Rhinosporidium seeberi sporangia from rhinosporidiosis tissue and extracting genomic DNA for next-generation sequencing

2025

Ansari, F., & Nagar, V. (2025). Characterization and biocontrol potential of two novel lytic Aeromonas dhakensis bacteriophages vB_AdhaM_G2 and P5 on basa fish fillets. Food Control, 111847.

Characterization and biocontrol potential of two novel lytic Aeromonas dhakensis bacteriophages vB_AdhaM_G2 and P5 on basa fish fillets

2025

Majeed, A., Ali, T., Hussian, Z., & Parey, S. H. (2025). Integrating Morphological, Molecular and Whole Genome (Mitogenomic) Approaches in Indian Lepidoptera.

Integrating Morphological, Molecular and Whole Genome (Mitogenomic) Approaches in Indian Lepidoptera

2025

Sharma, B. M., Mohapatra, M., Kumar, R., Swain, P. P., Das, I. I., Sahoo, L., … & Sundaray, J. K. (2025). Comprehensive insight into gut microbiota and their interaction with fatty acid profiles in Channa striata during the spawning season. Scientific Reports, 15(1), 37065.

Comprehensive insight into gut microbiota and their interaction with fatty acid profiles in Channa striata during the spawning season

2025

Balachandran, M., Chatterjee, R., Chaudhary, I., Jena, C., & Matange, N. (2025). Impeding pathways of intrinsic resistance in Escherichia coli confers antibiotic sensitization and resistance proofing. PLoS biology, 23(10), e3003443.

Impeding pathways of intrinsic resistance in Escherichia coli confers antibiotic sensitization and resistance proofing

2025

Tahbildar, S., Boopathi, P. A., Aiyaz, M., Kochar, S. K., Mugasimangalam, R. C., Rao, S. N., … & Das, A. Genomic Dynamics of Clinical Plasmodium vivax: Comparative Genomic Hybridization in Severe Malaria Cases. Frontiers in Malaria, 3, 1667330.

Genomic Dynamics of Clinical Plasmodium vivax: Comparative Genomic Hybridization in Severe Malaria Cases

2025

Balachandran, K. R. S., Mani, G., Sidharthan, A. T., Mary Leema, J. T., Senthilkumar, R., & Gopal, D. (2025). Unearthing the genetic resources of Arabian sea seamount and metagenomic insights into phosphate cycling genes for next generation plant biostimulants. Scientific Reports, 15(1), 35782.

Unearthing the genetic resources of Arabian sea seamount and metagenomic insights into phosphate cycling genes for next generation plant biostimulants

2025

Verma, A., Ghosh, B., Das, T., Deb, A., Mukherjee, A., Sengupta, P., … & Ghosh, Z. (2025). Parental noncoding RNA expression dynamics across sperm, oocyte, and zygote. NAR Genomics and Bioinformatics, 7(4), lqaf136.

Parental noncoding RNA expression dynamics across sperm, oocyte, and zygote

2025

Punniyamoorthy, D., & Jegadeesan, S. (2025). Whole genome sequencing reveals transcriptional and translational elements potentially regulating biotic and abiotic stress responses in cowpea. Scientific Reports, 15(1), 32913.

Whole genome sequencing reveals transcriptional and translational elements potentially regulating biotic and abiotic stress responses in cowpea

2025

Ajakkala, P. B., Kenjar, A. R., Prabell, S., Bhandarkar, S., Bhat, S., Sannejal, A. D., … & Raj, J. R. M. (2025). Updated phage banks essential to cope with pathogen evolution: Lessons from Klebsiella pneumoniae and their phages. Journal of Microbiology, Immunology and Infection.

Updated phage banks essential to cope with pathogen evolution: Lessons from Klebsiella pneumoniae and their phages

2025

Singothu, S., Baddi, H. M., Vulli, D., Singh, H., Guru, S. K., Bandaru, R. K., & BHANDARI, V. (2025). SAHA Counteracts Host Response Alterations Driven by Carbapenem-Resistant Acinetobacter baumannii: A Transcriptomic Deep Dive.

SAHA Counteracts Host Response Alterations Driven by Carbapenem-Resistant Acinetobacter baumannii: A Transcriptomic Deep Dive

2025

Padam, K. S. R., Hunter, K. D., & Radhakrishnan, R. (2025). Multifaceted regulation of the HOX cluster and its implications in oral cancer. Clinical Epigenetics, 17(1), 1-15.

Multifaceted regulation of the HOX cluster and its implications in oral cancer

2025

Rana, A., Verma, P., Pandit, S. B., Werren, J. H., Wang, X., & Raychoudhury, R. (2025). Genome assembly and annotation of the parasitoid jewel wasp Nasonia oneida. Scientific Data, 12(1), 1096.

Genome assembly and annotation of the parasitoid jewel wasp Nasonia oneida

2025

Binodh, A. K., Thankappan, S., Kumar, R. S., Ramasamy, N., Selvaraj, R., & Karthikeyan, R. (2025). Effect of gamma-ray induced mutagenesis on the NBS-LRR domain of mycoplasma resistance proteins in sesame (Sesamum indicum L.)”. Plant Gene, 41, 100480.

Effect of gamma-ray induced mutagenesis on the NBS-LRR domain of mycoplasma resistance proteins in sesame (Sesamum indicum L.)

2025

Tripathi, V., Pal, S., Subramanian, S., & Manickam, N. (2025). Unravelling dibenzothiophene degradation pathway in a novel Ancylobacter bharuchii IITR112 and insights from genome analysis. Journal of Environmental Chemical Engineering, 115630.

Unravelling dibenzothiophene degradation pathway in a novel Ancylobacter bharuchii IITR112 and insights from genome analysis

2025
Roy, P., Gujarati, S., Gupta, P., Gupta, I., Mahapatra, T., Gupta, D., … & Das, A. (2025). A tale of two parasites: a glimpse into the RNA methylome of patient-derived Plasmodium falciparum and Plasmodium vivax isolates.

Malaria Journal, 24(1), 1-15.

2025
Rajendran, P., Saini, S., Kumar, N., Vashistha, H., Thiruvengadam, K., Ramamoorthy, T., … & Padmapriyadarsini, C. (2023). Establishing proof of concept for utility of Trueprep®-extracted DNA in line-probe assay testing.
The International Journal of Tuberculosis and Lung Disease, 27(10), 742-747

2025
Chakraborty, A., Saroja, M. K., Garai, S., Sarkar, S., Bhattacharjee, A., Roy, K., … & Chatterjee, G. (2025). Deciphering the microbiome potential and metabolic profiling of animal waste co-composting reveals the co-occurrence network of non-microbial and microbial biostimulants to strengthen conservative practices in sustainable agriculture.
Chemical and Biological Technologies in Agriculture, 12(1), 1-21.

2025
Dubey, P., Bachhawat, A. K., Laxman, S., & Ahmad, M. S. (2025). Seo1p, a high affinity, plasma membrane transporter of the gamma-Glu-met dipeptide in yeasts and fungi.

bioRxiv, 2025-01.

 

2025
Uthaiah, N. M., Venkataramareddy, S. R., Mudhol, S., & Sheikh, A. Y. (2025). EPA-rich Nannochloropsis oceanica biomass regulates gut microbiota, alleviates inflammation and ameliorates liver fibrosis in rats.
Food Research International, 115733.

2025
Rashid, M. H., Kumar, S. P., Rajan, R., & Mamillapalli, A. (2025). Salivary microbiota dysbiosis and elevated polyamine levels contribute to the severity of periodontal disease.
BMC Oral Health, 25(1), 2.

2025
Xiao, H., Du, X., Hou, H., Guo, W., Tao, Z., Bao, S., … & Fang, Y. X. (2025). ATOH8 confers the vulnerability of tumor cells to ferroptosis by repressing SCD expression.
Cell Death & Differentiation, 1-16.

2025
Diesse, J. M., Jadhav, S., Tamekou, S. L., Simo, G., Dzoyem, J. P., Souopgui, J., … & Nema, V. (2025). Disturbances in the gut microbiota potentially associated with metabolic syndrome among patients living with HIV-1 and on antiretroviral therapy at Bafoussam Regional Hospital, Cameroon.
Diabetology & Metabolic Syndrome, 17(1), 86.

2025
Tripathi, S., Sangwan, R. S., Mishra, B., Jadaun, J. S., & Sangwan, N. S. (2020). Berry transcriptome: insights into a novel resource to understand development dependent secondary metabolism in Withania somnifera (Ashwagandha).
Physiologia plantarum, 168(1), 148-173.

2025
Ducat, A., Doridot, L., Calicchio, R., Méhats, C., Vilotte, J. L., Castille, J., … & Vaiman, D. (2016). Endothelial cell dysfunction and cardiac hypertrophy in the STOX1 model of preeclampsia.
Scientific reports, 6(1), 19196.

2025
Patturaj, M., Manikantan, A., Veerasamy, S., Elias, A. A., & Ramasamy, Y. (2025). Whole genome resequencing unveils population structure and wood trait associations for Indian teak germplasm.
Tree Genetics & Genomes, 21(2), 8.

2025
Tripathi, V., Pal, S., Subramanian, S., & Manickam, N. (2025). Unravelling dibenzothiophene degradation pathway in a novel Ancylobacter bharuchii IITR112 and insights from genome analysis.
Journal of Environmental Chemical Engineering, 115630

2025
Haynes, Z., Nathan, S. D., Aryal, S., & Nyquist, A. (2024). Correlation of classic history, imaging and pathology with novel genetics in Birt-Hogg-Dubé syndrome.
BMJ Case Reports CP, 17(12), e262177.

2025
Park, H. Y., Jung, M., Lim, Y. J., Subramaniyam, S., Cho, S., Park, B. J., & Shin, Y. (2024). Genome Resources for Identifying SNPs Associated With Eight Horticultural Traits in Commercial Korean Elite Radish (Raphanus sativus) Lines.
Plant Breeding.

2025
Manimekalai, R., Saranya, J., Saravanakumar, K., Rajagopal, S., Jini, N., Selvi, A., … & Gomathi, R. (2024). Small RNA profiling and co-networking analysis identifies stress-responsive miRNAs involved in sugarcane and its wild species.
Plant Physiology Reports, 1-19.

2025
Sadaqat, Z., Joseph, S., Verma, C., Muni Reddy, J., Prakash, A., Thomas, T., … & Vyas, N. (2025). Real time-PCR a diagnostic tool for reporting copy number variation and relative gene-expression changes in pediatric B-cell acute lymphoblastic leukemia—a pilot study.
Biology Methods and Protocols, 10(1), bpae098.

2025
Bhaskar, S., Gowda, J., Hegde, A., Thumu, S. C. R., Banerjee, S., Ramanan, N., … & Prasanna, J. (2024). Zic3 enables bimodal regulation of tyrosine hydroxylase expression in olfactory bulb and midbrain derived neurons.

34344454

2025
Bisht, N., Mayilraj, S., Kumar, S., & Kaur, N. (2024). Identification of NRPS and type II PKS biosynthetic gene cluster (s) encoding decaplanin and kigamicin from Amycolatopsis regifaucium

DSM 45072T.

2025
Gelgie, A. E., Schneider, P., Citti, C., Dordet-Frisoni, E., Gillespie, B. E., Almeida, R. A., … & Lysnyansky, I. (2024). Mycoplasma bovis 5′-nucleotidase is a virulence factor conferring mammary fitness in bovine mastitis.
PLoS Pathogens, 20(11), e1012628.

2025
MISHRA, S., Verma, V., Pradhan, S., Dwivedi, M., Jorwal, P., Gowda, V., … & Nongthomba, U. (2024). Urolithin A mitigates behavioral and synaptic deficits associated with epilepsy through VDAC-1 inhibition:

A novel treatment approach.

2025
Singh, S., Subramanian, S., Gupta, N., Bajaj, A., & Manickam, N. (2024). Genomic insights on gene clusters and pathways for the biodegradation of plastic compounds: Unravelling the metabolic versatility in a Dietzia kunjamensis IITR165.
Current Research in Biotechnology, 100258.

2024
Krishnan, S., Karpe, S. D., Kumar, H., Nongbri, L. B., Ramanathan, S., Grosse-Wilde, E., … & Borges, R. M. (2023). Sensing volatiles throughout the body: Geographic and tissue-specific olfactory receptor expression in the fig wasp Ceratosolen fusciceps.
bioRxiv, 2023-03.

2024
Ueland, T., Astrup, E., Otterdal, K., Lekva, T., Janardhanan, J., Michelsen, A. E., … & Damås, J. K. (2024). CC Motif Ligand 7 (CCL7) and CC Motif Chemokine Receptor 3 (CCR3) dysregulation in patients with scrub typhus and association with mortality. The Journal of Infectious Diseases, jiae401.

The Journal of Infectious Diseases, jiae401.

2024
Jasna, V., Parvathi, A., Gireesh, K. T., & Pazhayamadom, D. G. (2024). Sediment bacterial diversity in the upwelling regions of Alappuzha

on the southwest coast of India.

2024
Singh D. Mosahari, P. V. Sharma, P. Neog K., & Bora U. (2024). Comparative Genomic and Phylogenetic Analysis of the Complete Mitochondrial Genome of Cricula trifenestrata (Helfer) Among Lepidopteran Insects.

Genome, (ja).

2024
Rahila, K., & Vardhanan, Y. S. (2024). Comparative transcriptome profiling of two pesticides, Acephate and Chlorantraniliprole in non-targeted insect model, Drosophila melanogaster.

Pesticide Biochemistry and Physiology, 106023.

2024
Sundaresan, A. K., Gangwar, J., Murugavel, A., Malli Mohan, G. B., & Ramakrishnan, J. (2024). Complete genome sequence, phenotypic correlation and pangenome analysis of uropathogenic Klebsiella spp.
AMB Express, 14(1), 78.

2024
Srinivasulu, B., & Chelmala, S. (2024). Molecular diet analysis using fecal DNA metabarcoding reveals the whole and the core diet of the critically endangered Kolar leaf-nosed bat Hipposideros hypophyllus and its congeners.
545565665

2024
Singh, P., Sharma, S., & Kumar Rath, S. (2014). Genistein induces deleterious effects during its acute exposure in Swiss mice.
BioMed research international, 2014(1), 619617.

2024
Bandekar, M., More, K. D., Seleyi, S. C., Ramaiah, N., Kekäläinen, J., & Akkanen, J. (2024). Comparative analysis of microbiome inhabiting oxygenated and deoxygenated habitats using V3 and V6 metabarcoding of 16S rRNA gene.
Marine Environmental Research, 106615.

2024
Sharma, P., Singh, S., Singh, A. V., Das, K., Bhaskar, Y., Goel, I., … & Das, R. (2024). Alteration of gastric microbiota in Helicobacter pylori-infected individuals suffering from GERD, DU, and gastritis.
Indian Journal of Pathology and Microbiology, 10-4103.

2024
Sharma, P., Singh, S., Singh, A. V., Das, K., Bhaskar, Y., Goel, I., … & Das, R. (2024). Alteration of gastric microbiota in Helicobacter pylori-infected individuals suffering from GERD, DU, and gastritis.
Indian Journal of Pathology and Microbiology, 10-4103.

2024
Kumar, A., Kashyap, J., Mandal, S., Mishra, G., Rath, J., Rout, G. R., … & Panigrahy, M. (2024). Mechanism of action of carbon nanoparticle verified in rice: Improved water use efficiency is the key.
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2024
Sharma, G., Kaur, B., Singh, V., Raheja, Y., Falco, M. D., Tsang, A., & Chadha, B. S. (2024). Genome and secretome insights: unravelling the lignocellulolytic potential of Myceliophthora verrucosa for enhanced hydrolysis of lignocellulosic biomass.
Archives of Microbiology, 206(5), 1-18.

2024
Kanodia, A., Monga, R., Ilyas, M., Verma, Y., Mohapatra, S., Rao, N. S., … & Atmakuri, K. (2024). Metagenome Analysis of Cholesteatoma-associated Bacteria: A Pilot Study.
Indian Journal of Otolaryngology and Head & Neck Surgery, 1-12.

2024
Shi, X., Sharma, S., Chmielewski, R. A., Markovic, M. J., VanEpps, J. S., & Yau, S. T. (2024). Rapid diagnosis of bloodstream infections using a culture-free phenotypic platform.
Communications Medicine, 4(1), 77.

2024
Rout, A. K., Dixit, S., Tripathy, P. S., Rout, S. S., Parida, S. N., Parida, P. K., … & Behera, B. K. (2024). Metagenomic Landscape of sediments of river Ganga reveals Microbial Diversity, potential Plastic and Xenobiotic degradation Enzymes.
Journal of Hazardous Materials, 134377.

2024
Song, T., Gupta, S., Sorokin, Y., Frenkel, O., Cytryn, E., & Friedman, J. (2024). A Burkholderia cenocepacia-like environmental isolate strongly inhibits the plant fungal pathogen Zymoseptoria tritici.
Applied and Environmental Microbiology, e02222-23.

2024
Yadav, E. J., Prabhakar, Y. K., Shanmugam, G., Vijayakumar, P., Kumar, M. J., Vijayakumar, N., & Murthy, J. S. R. (2024). Whole genome characterization of Jaagsiekte Sheep Retrovirus isolated from OPA infected sheep (India) and structural assessment (In-silico) of proteins of JSRV.
The Microbe, 100068.

2024
Nair, G. R., & Raja, S. S. (2021). Insights Into the Diversity of Terrestrial Soil Bacterial Communities Associated With Four Contrasting Köppen Climatic Zones.
645656677

2024
Acharya, P., Singh, U. S., Rajamannar, V., Muniaraj, M., Nayak, B., & Das, A. (2024). Genome resequencing and genome-wide polymorphisms in mosquito vectors Aedes aegypti and Aedes albopictus from south India.
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2024
Anandan, A., Panda, S., Mahender, A., & Murugaiyan, V. (2024). Breeding Rice Variety with Suitable Plant Ideotype for Next-Generation Indian Agriculture in the Changing Climatic Conditions. In Climate Change Impacts on Soil-Plant-Atmosphere Continuum (pp. 507-528). Singapore:
Springer Nature Singapore.

2024
Khairnar, K., & Tomar, S. S. (2024). COVID-19 genome surveillance: A geographical landscape and mutational mapping of SARS-CoV-2 variants in central India over two years.
Virus Research, 344, 199365.

2024
Krishnaswamy, S. M., Arunachal, G., Singh, K. G., Thomson, V. S., George, P., Rao, S., & Danda, S. (2024). Investigation of mutation spectrum amongst patients with familial primary cardiomyopathy using targeted NGS in Indian population.
Journal of Applied Genetics, 1-14.

2024
Panzade, K. P., Tribhuvan, K. U., Pawar, D. V., Jasrotia, R. S., Gaikwad, K., Dalal, M., … & Padaria, J. C. (2024). Discovering the regulators of heat stress tolerance in Ziziphus nummularia (Burm. f) wight and walk.-arn.
Plant Cell Reports, 43(4), 104.

2024
Shikha, Pandey, D. K., Upadhyay, S., Phukan, U. J., & Shukla, R. K. (2024). Transcriptome analysis of waterlogging-induced adventitious root and control taproot of Mentha arvensis.
Physiology and Molecular Biology of Plants, 1-15.

2024
Aswathy, C. S., Roy, C. B., Shahina, K., Vinod, M. P., & Biji, C. L. (2024). Comparative transcriptomic analysis of rubber (Hevea brasiliensis) clones differing in disease tolerance provides novel insights into the disease response associated with abnormal leaf fall disease caused by Phytophthora meadii.
South African Journal of Botany, 168, 130-150.

2024
Qian, Z., Li, Y., Pratush, A., Kan, J., Gu, J. D., Peng, T., … & Hu, Z. (2024). A comparative analysis of the microbial communities and functional genes of the nitrogen cycling in mangroves of China, Indian and Malaysia.
International Biodeterioration & Biodegradation, 190, 105767.

2024
Sarath, P., Parveen, M., Sreekumar, V. B., Dasgupta, M., Bohra, H. R., & Dev, S. A. (2024). Genetic erosion and population decline in four threatened rattan species of India: Springer Nature Singapore.
insights from genome-wide microsatellite analysis.

2024
Soman, A., Pradhan, T., Krishna, R., Hermon, E. S., Somanathan, T., Jinto, E. G., … & Nair, S. A. (2024). Decoding Early-Onset of Colorectal Cancer:
Insights into SERPINA3 Expression Patterns.

2024
Sood, C., Verma, J. K., Basak, R., Kapoor, A., Gupta, S., & Mukhopadhyay, A. (2024). Leishmania highjack host lipid body for its proliferation in macrophages by overexpressing host Rab18 and TRAPPC9 by downregulating miR-1914-3p expression.
Plos Pathogens, 20(2), e1012024.

2024
Golender, N., & Hoffmann, B. (2024). The Molecular Epidemiology of Epizootic Hemorrhagic Disease Viruses Identified in Israel between 2015 and 2023.
Epidemiologia, 5(1), 90-105.

2024
Arun, T. S., & Saxena, V. K. (2024). Comparative metagenomic analysis of gut microbial diversity of Indian native chicken (CARI Nirbheek) under different systems of management using NGS.
.

2024
Yadav, P., Das, J., Sundharam, S. S., & Krishnamurthi, S. (2024). Analysis of Culturable Bacterial Diversity of Pangong Tso Lake via a 16S rRNA Tag Sequencing Approach.
Microorganisms, 12(2), 397.

2024
Kumar, A., Manasa S, L., Kashyap, J., Mandal, S., Mishra, G., Rath, J., … & Panigrahy, M. (2024). Carbon nanoparticle exposure strengthens water-relation parameters by stimulating abscisic acid pathway and aquaporins genes in rice.
bioRxiv, 2024-02.

2024
Rout, A. K., Tripathy, P. S., Dixit, S., Behera, D. U., Behera, B., Das, B. K., & Behera, B. K. (2024). Metagenomics analysis of sediments of river Ganga, India for bacterial diversity, functional genomics, antibiotic resistant genes and virulence factors.
Current Research in Biotechnology, 100187. (PDF)

2024
Sahoo, S., Behera, M. R., Mishra, B., Kar, S., Sahoo, P., Sahoo, N., & Biswal, S. (2024). Microbial Diversity and Resistome in Milk of Cows with Subclinical Mastitis in a Coastal District of Odisha, India.
Indian Journal of Microbiology, 1-10.

2024

Arun, T. S., Saxena, V. K., & Vineetha, P. G. (2023). Metagenomic analysis of intestinal microbiome of Indian male line broiler reared under different management systems.

2023
Gangopadhayya, A., Lole, K., Ghuge, O., Ramdasi, A., Kamble, A., Roy, D., … & Cherian, S. S. (2023). Metagenomic Analysis of Viromes of Aedes Mosquitoes across India.

2023
Kunte, P., Barberio, M., Tiwari, P., Sukla, K., Harmon, B., Epstein, S., … & Yajnik, C. (2023). Neonatal adiposity is associated with microRNAs in adipocyte-derived extracellular vesicles in maternal and cord blood, a discovery analysis.

International Journal of Obesity, 1-11.

 

2023

Vishwakarma, G., Saini, A., Bhardwaj, S. C., Kumar, S., & Das, B. K. (2023). Comparative transcriptomics of stem rust resistance in wheat NILs mediated by Sr24 rust resistance gene.

Plos one, 18(12), e0295202.

 

2023
Singh, I., Pathak, V. K., Lavania, M., Ahuja, M., Sharma, R., Narang, T., … & Sengupta, U. (2023). Genomic characterization of Mycobacterium lepromatosis from ENL patients from India.

Infection, Genetics and Evolution, 105537.

 

2023
Kumari, K., Aggarwal, Y., & Singh, R. P. (2023). Molecular characterization and in-depth genomic analysis to unravel the pathogenic features of an environmental isolate Enterobacter sp. S-33.

International Microbiology, 1-16.

 

2023
Karyakarte, R. P., Das, R., Joshi, S., Jayaram, A., Yanamandra, S., Shende, S., … & Jadhav Sr, M. G. (2023). Genomic Characterization of an Emerging SARS-CoV-2 Variant During the Early Second Wave of the SARS-CoV-2 Pandemic in Maharashtra, India.

Cureus, 15(11).

 

2023
Mishra, L. K., & Shashidhar, R. (2023). Absence of Nitrogen regulatory protein C affects the growth physiology of Salmonella Typhimurium by limiting glucose transport in the cell.

Cureus, 15(11).

 

2023
Yadav, P., Sharma, K., Tiwari, N., Saxena, G., Asif, M. H., Singh, S., & Kumar, M. (2023). Comprehensive transcriptome analyses of Fusarium-infected root xylem tissues to decipher genes involved in chickpea wilt resistance.

3 Biotech, 13(12), 390.

 

2023
Kannoth, S., Ali, N., Prasanth, G. K., Arvind, K., Mohany, M., Hembrom, P. S., … & Grace, T. (2023). Transcriptome analysis of Corvus splendens reveals a repertoire of antimicrobial peptides.

Scientific Reports, 13, 18728.

 

2023
Bhargav, P., Chaurasia, S., Kumar, A., Srivastava, G., Pant, Y., Chanotiya, C. S., & Ghosh, S. (2023). Unraveling the terpene synthase family and characterization of BsTPS2 contributing to (S)-(+)-linalool biosynthesis in Boswellia.

Plant Molecular Biology, 1-18.

 

2023
Prasanna, J. A., Mandal, V. K., Kumar, D., Chakraborty, N., & Raghuram, N. (2023). Nitrate-responsive transcriptome analysis of rice RGA1 mutant reveals the role of G-protein alpha subunit in negative regulation of nitrogen-sensitivity and use efficiency.

Plant Cell Reports, 1-24.

 

2023
Pegu, S. R., Das, P. J., Sonowal, J., Sengar, G. S., Deb, R., Yadav, A. K., … & Gupta, V. K. (2023). Japanese Encephalitis Virus Genotype III Strains Detection and Genome Sequencing from Indian Pig and Mosquito Vector.

Vaccines, 11(1), 150.

2022
Panda, S., Singh, P. K., Mishra, S., Mitra, S., Pattnaik, P., Adhikary, S. D., & Mohapatra, R. K. (2023). Indian Biosimilars and Vaccines at Crossroads–Replicating the Success of Pharmagenerics.

Vaccines, 11(1), 150.

2022
Kolathur, K. K., Sharma, P., Kadam, N. Y., Shahi, N., Nishitha, A., Babu, K., & Mishra, S. K. (2023). The ubiquitin‐like protein Hub1/UBL‐5 functions in pre‐mRNA splicing in Caenorhabditis elegans.

FEBS letters, 597(3), 448-457.

 

2022
Punniyamoorthy, D., & Jegadeesan, S. (2022). Gamma-rays induced genome wide stable mutations in cowpea deciphered through whole genome sequencing.

FEBS letters, 597(3), 448-457.

 

2022
Narayanan, A., Kumar, P., Chauhan, A., Kumar, M., Yadav, K., Banerjee, A., … & Prasad, R. (2022). Directed Evolution Detects Supernumerary Centric Chromosomes Conferring Resistance to Azoles in Candida auris.

Mbio, 13(6), e03052-22.

 

2022
Marimuthu, J., Rangamaran, V. R., Subramanian, S. H. S., Balachandran, K. R. S., Kulasekaran, N. T., Vasudevan, D., … & Gopal, D. (2022). Deep-sea sediment metagenome from Bay of Bengal reveals distinct microbial diversity and functional significance.

Genomics, 114(6), 110524.

 

2022
Mbagwu, F. O., Auta, S. H., Bankole, M. T., Kovo, A. S., & Abioye, O. P. (2023). Biosynthesis and characterization of silver nanoparticles using Bacillus subtilis, Escherichia coli, and leaf extracts of Jatropha and Ocimum species.

International Nano Letters, 13(1), 63-73.

 

2022
Fatima, H., Kumar, S., & Khare, S. K. (2022). Insights from the genome sequence of Bacillus tropicus EMB20, an efficient β-lactamase-producing bacterium.

 3 Biotech, 12(12), 330.

 

2022
Sreekumar, S., Divya, K., Joy, N., & Soniya, E. V. (2022). De novo transcriptome profiling unveils the regulation of phenylpropanoid biosynthesis in unripe Piper nigrum berries.

BMC plant biology, 22(1), 1-14.

 

2022
Payal Srivastava, Anchal Garg, Rajesh Chandra Misra, Chandan Singh Chanotiya, Sumit Ghosh, UGT86C11 is a novel plant UDP-glycosyltransferase involved in labdane diterpene biosynthesis.

Journal of Biological Chemistry, 10.1016/j.jbc.2021.101045, (101045), (2021).

 

2021
Journal of Biological Chemistry, 10.1016/j.jbc.2021.101045, (101045), (2021).

 Frontiers in Plant Science (2020)

 

2021
Amit Raychoudhuri, Anjani Kumari Naru, Sitarami Reddy Kanubothula, Ravali Uddala, Development of an experimental inactivated vaccine from Vero cell adapted Enterovirus D68,Virus Research(304)2021,

virusres.2021.198528.

 

2021
Yadav, E.J., Prabhakar, Y.K., Sreenath, K. et al. Molecular investigation and phylogenetic analysis of Jaagsiekte sheep retrovirus in naturally ovine pulmonary adenocarcinoma infected small ruminants in Andhra Pradesh, India.

Comp Clin Pathol (2021).

2021
S. DIXIT et al., Evaluation of Community Structures and their Physicochemical Correlation with Five Hot Springs in India.

Geomicrobiology Journal (2021).

 

2021
Shaikh, A., Sriraman, K., Vaswani, S. et al. Early phase of effective treatment induces distinct transcriptional changes in Mycobacterium tuberculosis expelled by pulmonary tuberculosis patients.

Sci Rep 11, 17812 (2021).

2021
Alterations of salivary microbial community associated with oropharyngeal and hypopharyngeal squamous cell carcinoma patients.

Panda M, Rai Ak et al., 2019

2019
High-throughput metabolomic and transcriptomic analyses vet the potential route of cerpegin biosynthesis in two varieties of Ceropegia bulbosa Roxb Sachin A.

Gharat, Balkrishna A. Shinde et al.,

2019
Identification of Novel microRNAs and their targets in chlorophytum borivilianum by small RNA and degradome sequencing.

 Monika K, Nishant K et al.,KeAI 2019

2019
Identification if miRNA targets by AtFT overexpression in Tobacco

2019
Overexpression of native Musa-miR397 enhances plant biomass without compromising abiotic stress tolerance in banana.

Prashanti P, Karuna Y, Scientific Reports (2019), Volume 9.

2019
First Draft Genome Sequence of Wheat Spot Blotch Pathogen Bipolaris sorokiniana BS_112 from India, Obtained Using Hybrid Assembly Rashmi Aggarwal,Sapna Sharma American Society for Microbiology

2019
Asparagus racemosus bZIP transcription factor-regulated squalene epoxidase (ArSQE) promotes germination and abiotic stress tolerance in transgenic tobacco Swati Upadhyay, Gajendra Singh Jeena Science Direct

2019
Himanshu Sharma and B. Anand, Ribosome assembly defects subvert initiation Factor3 mediated scrutiny of bona fide start signal, Nucleic acids Research

2019
Celecoxib potentiates antibiotic uptake by altering membrane potential and permeability in Staphylococcus aureus Gajapati Y. N. Varma. Githavani Kummari

2019
Analysis of molecular switch between leukocyte and substrate adhesion in bone marrow endothelial cells Swati Gupta, Gurudutta Gangenahalli

2019
Transcriptomic analysis of a Sorghum bicolor landrace identifies a role for beta-alanine betaine biosynthesis in drought tolerance N. Devnaraina,B.G. Crampton

2019
The sensor kinase MtrB of Mycobacterium tuberculosis regulates hypoxic survival and establishment of infection Srijon KB, Suruchi L

2019
Diana Pradhan, Vidya Devi Negii et al., Repeated in-vitro and in-vivo exposure leads to genetic alteration, adaptations, and hypervirulence in Salmonella, 2019

2019
Genetic diversity and population structure of the threatened chocolate mahseer (Neolissochilus hexagonolepis McClelland 1839) based on SSR markers: implications for conservation management in Northeast India

2019
Functional annotation of differentially expressed genes under salt stress in Dichanthium annulatum Anita Mann,
Naresh Kumar et al., Ind J Plant Physiol., 2018

2019
Vijayakumar M. Malathi, Ravi P. More, et al., Gut Bacterial Diversity of Insecticide-Susceptible and -Resistant Nymphs of the Brown Planthopper Nilaparvata lugens Stål (Hemiptera: Delphacidae) and Elucidation of Their Putative Functional Roles Journal of microbial Biotechnology, 2018

2019
Curcumin induced oxidative stress causes autophagy and apoptosis in bovine leucocytes transformed by Theileria annulata Prasanna Babu Araveti & Anand Srivastava

2019
A prospective radomized,double-blind,placebo-controlled,dose-response relationship study to investigate efficacy of fructo-oligosaccharides on human gut microflora

2019
miR828 and miR858 regulate VvMYB114 to promote anthocyanin and flavonol accumulation in grapes

2019
De novo assembly of the Indian blue peacock(Pavo Cristatus) genome using Oxford Nanopore Technology and Illumina Sequencing

2019
Thiagarajan Y, Ashok kumar R, Sivakumaran T.S, Comparative study on Performance of graphite and Carbon Nano Tubes (CNT) coated SSM electrodes in cow dung slurry-fed Microbial fuel cell.

2019
KMT1 family methyltransferases regulate heterochromatin–nuclear periphery tethering via histone and non-histone protein methylation Publication: EMBO Reports (2019) Authors: Radhika Arasala Rao , Alhad Ashok Ketkar, Neelam Kedia, Vignesh K Krishnamoorthy, Vairavan Lakshmanan, Pankaj Kumar , Abhishek Mohanty , Shilpa Dilip Kumar , Sufi O Raja , Akash Gulyani , Chandra Prakash Chaturvedi , Marjorie Brand ,Dasaradhi Palakodeti & Shravanti Rampalli February 12, 2019

2019
Transcriptome profiling reveals genetic basis of disease resistance against Corynespora cassiicola in rubber tree (Hevea brasiliensis) Publication: Current Plant Biology Publisher: Elsevier.
February 24, 2019

2019
Circular RNA Profiling by Illumina Sequencing via Template-Dependent Multiple Displacement Amplification Authors: Ashirbad Guria,Kavitha Velayudha Vimala Kumar,1 Nagesh Srikakulam, Anakha Krishnamma,Saibal Chanda, Satyam Sharma,Xiaofeng Fan, and Gopal Pandi, Journal: BioMed Research International Volume 2019, Article ID 2756516, 12 pages January 28, 2019

2019
Next-Generation Sequencing Reveals the Role of Epigallocatechin-3-Gallate in Regulating Putative Novel and Known microRNAs Which Target the MAPK Pathway in Non-Small-Cell Lung Cancer A549 Cells Authors: Vaishali Bhardwaj and Abul Kalam Azad Mandal Journal: Molecules 2019

2019
Genome‐wide analysis reveals miR‐3184‐5p and miR‐181c‐3p as a critical regulator for adipocytes‐associated breast cancer Authors: Dheeran Rajarajan Sweetha Selvarajan Mamilla R.
Charan Raja Santanu Kar Mahapatra Ravi Kasiappan January 17, 2019 Publication: PNAS

2019
A SIR-independent role for cohesin in subtelomeric silencing and organization Authors: Deepash Kothiwala and Shikha Lalorayaa Publication:

 PNAS, January 17, 2019

2019
Identification and expression profiling of miRNAs in two color variants of carrot (Daucus carota L.) using deep sequencing Authors:Bhavana Bhan, Archana Koul, Deepak Sharma, Malik Muzafar Manzoor, Sanjana Kaul, Suphla Gupta, Manoj K.

 Dhar
Publication: Plos One
March 7, 2019

2019
Whole chloroplast genome and gene locus phylogenies reveal the taxonomic placement and relationship of Tripidium (Panicoideae: Andropogoneae) to sugarcane Authors: Dyfed Lloyd Evans, Shailesh V. Joshi and Jianping Wang Journal:

BMC Evolutionary Biology2019 19:33

2019
Prophage-Driven Genomic Structural Changes Promote Bartonella Vertical Evolution Ricardo G., Barak M., et al., Genome Biology and Evolution, Volume 10, Issue 11, November 2018, Pages 3089–3103

2018
Identification and characterization of miRNA transcriptome in Jatropha curcas by high-throughput sequencing VN Prakash, VJ Jadeja Plant gene, 2018 – Elsevier

2018
Evidence for up and down regulation of 450 genes by rpoB12 (rif) mutation and their implications in complexity of transcription modulation in Escherichia coliS Meenakshi, MH Munavar Microbiological research, 2018 – Elsevier

2018
A Splicing-Independent Function of RBM10 Controls Specific 3′ UTR Processing to Regulate Cardiac Hypertrophy, Cell Reports, Volume 24, Issue 13, September 2018, Pages 3539-3553 Nimmy Mohan, Vikas Kumar, Divya T.

Kandala, Chandrasekharan C. Kartha, Rakesh S. Laishram,

2018
Ahmed A, Adiga V, Nayak S, Uday Kumar JAJ, Dhar C, et al. (2018) Circulating HLA-DR+CD4+ effector memory T cells resistant to CCR5 and PD-L1 mediated suppression compromise regulatory T cell function in tuberculosis.

 PLOS Pathogens 14(9):e1007289. https://doi.org/10.1371/journal.ppat.1007289

2018
Anand, Atul, Jayaramaiah, Ramesha H., Beedkar, Supriya D., Dholakia, Bhushan B., Lavhale, Santosh G., Punekar, Sachin A., Gade, Wasudeo N., Thulasiram, Hirekodathakallu V., Giri, Ashok P. Terpene profiling, transcriptome analysis and characterization of cis-β-terpineol synthase from Ocimum. Physiology and Molecular Biology of Plants. 0974-0430.

October 2018. https://doi.org/10.1007/s12298-018-0612-6

2018
Shantanu Kundu, Vikas Kumar, Kaomud Tyagi, Rajasree Chakraborty, Iftikar Rahaman, Kailash Chandra. Complete mitochondrial genome of Indian tent turtle,Pangshura tentoria and comparative mitochondriomics. PeerJ Preprints.

September 2018. https://doi.org/10.7287/peerj.preprints.27202v1

2018
Mondal, Tapan Kumar, Rawal, Hukam Chand, Chowrasia, Soni, Varshney, Deepti, Panda, Alok Kumar, Mazumdar, Abhishek, Kaur, Harmeet, Gaikwad, Kishor, Sharma, Tilak Raj, Singh, Nagendra Kumar. September 2018. Draft genome sequence of first monocot-halophytic species Oryza coarctata reveals stress-specific genes.

Scientific Reports. 13698 VL. 2045-2322. https://doi.org/10.1038/s41598-018-31518-y

2018
Ondara Zablon Kerima, Pathappa Niranjana, Vinay Kumar B.S., Rajeshwari Ramachandrappa, Sharanappa Puttappa, Yadavalli Lalitha, Sushil K.Jalali, Chandish R.Ballal, Hirekodathakallu V.Thulasiram. De novo transcriptome analysis of the egg parasitoid Trichogramma chilonis Ishii (Hymenoptera: Trichogrammatidae): A biological control agent.

Gene Reports. Volume 13, December 2018, Pages 115-129

2018
Sowmya Handenahally Reddy Sumanth Kumar Kambalimath Rajesh Kumar Singhal Manjunath K Chikkakariyappa Raveendran Muthurajan Mavinahalli P Rajanna Rohini Sreevathsa Amitha Mithra Sevanthi Trilochan Mohapatra Sarala Neelamraju Viswanathan Chinnuswamy S Gopal Krishnan Ashok K Singh Nagendra K Singh Rameshwar P Sharma Sreeman M Sheshshayee. Allele specific analysis of single parent backcross population identifies HOX10 transcription factor as a candidate gene regulating rice root growth.

03 September 2018. https://doi.org/10.1111/ppl.12826

2018
Nair, Raji R. Madiwale, Shreyas V. Saini, Deepak Kumar, August 2018. Clampdown of inflammation in aging and anticancer therapies by limiting upregulation and activation of GPCR, CXCR4.

 npj Aging and Mechanisms of Disease. 2056-3973. https://doi.org/10.1038/s41514-018-0028-0

2018
Manoharan Shankar, Anbazhagan Mageswari, Chandrasekaran Suganthi, Paramasamy Gunasekaran, Kodiveri M. Gothandam, Sivashanmugam Karthikeyan. Genome Sequence of a Moderately Halophilic Bacillus cereus Strain, TS2, Isolated from Saltern Sediments.

Microbiol Res Announc Aug 2018, 7 (6) e00873-18; DOI: 10.1128/MRA.00873-18

2018
Vishal Singh Somvanshi, Madhura Tathode, Rohit Nandan Shukla, Uma Rao, Nematode Genome Announcement: A Draft Genome for Rice Root-Knot Nematode, Meloidogyne graminicola.

 Journal of Nematology. VOLUME 50 , ISSUE 2 , ISSN (Online) , DOI: 10.21307/jofnem-2018-018, September 2018. The Society of Nematologists

2018
Asmaa Missoum, DNA Microarray and Bioinformatics Technologies: A mini-review, Proceedings of the Nature Research Society, 2, 02010 (2018).

 doi: 10.11605/j.pnrs.201802010

2018
Sundaresan, Srivignesh, Philosoph Hadas, Sonia Ma, Chao – Jiang, Cai-Zhong, Riov, Joseph, Mugasimangalam, Raja, Kochanek, Betina, Salim, Shoshana, Reid, Michael S., Meir, Shimon, The Tomato Hybrid Proline-rich Protein regulates the abscission zone competence to respond to ethylene signals, Horticulture Research 2018, Volume 5, Issue 1, Pages 2052-7276

2018
Ramasamy Yasodha, Ramesh Vasudeva, Swathi Balakrishnan, Ambothi Rathnasamy Sakthi, Nicodemus Abel, Nagarajan Binai, Balaji Rajashekar, Vijay Kumar Waman Bachpai, Chandrasekhara Pillai, Suma Arun Dev; Draft genome of a high value tropical timber tree, Teak (Tectona grandis L. f): insights into SSR diversity, phylogeny and conservation, May 2018, DNA Research

2018
Chandreyee Datta Arijita Subuddhi Manish Kumar Thurbu Tshering Lepcha Sohini Chakraborty Kuladip Jana Zhumur Ghosh Asish Kumar Mukhopadhyay Joyoti Basu Manikuntala Kundu, Genome‐wide mRNA–miRNA profiling uncovers a role of the microRNA miR‐29b‐1‐5p/PHLPP1 signalling pathway in Helicobacter pylori‐driven matrix metalloproteinase production in gastric epithelial cells,

Cellular Microbiology, May 2018

2018
Mohammad Rumman, Abhijit Majumder, Linda Harkness, Balu Venugopal, M.B. Vinay, Malini S. Pillai, Moustapha Kassem, Jyotsna Dhawan, Induction of quiescence (G0) in bone marrow stromal stem cells enhances their stem cell characteristics, Stem Cell Research,

Volume 30, 2018, Pages 69-80, ISSN 1873-5061

2018
Sanjeev Kumar Shukla, Shubhra Shukla, Rehan Khan, Anuj Ahuja, Lakshya Veer Singh, Nitin M. Kamble, Anupam Dhasmana, Naveen Sharma, Bipin Chand, Ajay Vir Singh. Pathway analysis of differentially expressed genes in Mycobacterium bovis challenged bovine macrophages (2017)

olume 114, Page 1235, 10.1038/bjc.2016.91

2017
Ella, Krishna Murthy Kandaswamy, Sumathy Inactivated chikungunya viruses (CHIKV) comprising an E1-K211E mutation.

 FPO (2017)

2017
K. Polavarapu, , A. Nalini, S. MK, S. Narayan Rao, V. Preethish-Kumar, D. Sekar, V. Sundar, S. Vengalil, S. Nashi, V. Krishnamurthy. A next generation sequencing based mutational analysis in Duchenne and Becker muscular dystrophy.

Journal of the Neurological Sciences (2017).

2017
Jyoti Kureel, Aijaz A. John, Ravi Prakash, Divya Singh. MiR 376c inhibits osteoblastogenesis by targeting Wnt3 and ARF-GEF-1 -facilitated augmentation of beta-catenin transactivation.

Journal of Cellular Biochemistry (2017).

2017
Soumyadev Sarkar, Somnath Chakravorty, Avishek Mukherjee, Debanjana Bhattacharya, Semantee Bhattacharya, Ratan Gachhu. De novo RNA-Seq based transcriptome analysis of Papiliotrema laurentii strain RY1 under nitrogen starvation.

Gene (2017).

2017
Rathinasamy Karpagam, Kalimuthu Jawaharraja, Balasubramaniem Ashokkumar, Jayavel Sridhar, Perumal Varalakshmi, Unraveling the lipid and pigment biosynthesis in Coelastrella sp. M-60: Genomics-enabled transcript profiling.

 Algal Research (2018).

2017
G Kiran Kumar Reddy, Y V Nancharaiah. Sustainable bioreduction of toxic levels of chromate in a denitrifying granular sludge reactor.

Environmental Science and Pollution Research (2017).

2017
P.A. Sutton, P.V. Jithesh1, R.P. Jones, J.P. Evans, D. Vimalachandran, H.Z. Malik, B.K. Park, C.E. Goldring, D.H. Palmer, N.R. Kitteringham. Exome sequencing of synchronously resected primary colorectal tumours and colorectal liver metastases to inform oncosurgical management.

The Journal of Cancer Surgery (2017).

2017
Poulomi Banerjee, Harshini Surendran, Kapil Bharti, Kaoru Morishita, Anurag Varshney, Rajarshi Pal. Long non-coding RNA RP11-380D23.2 drives distal-proximal patterning of the lung by regulating PITX2 expression.

Stem Cells (2017).

2017
Deepika Singh, Debajyoti Kabiraj, Pragya Sharma, Hasnahana Chetia, Ponnala Vimal Mosahari, Kartik Neog, Utpal Bora. The mitochondrial genome of Muga silkworm (Antheraea assamensis) and its comparative analysis with other lepidopteran insects.

PLoS ONE (2017).

2017
Dillon F. Da Fonte, Christopher J. Martyniuk, Lei Xing, Adrian Pelin, Nicolas Corradi, Wei Hu & Vance L. Trudeau. Secretoneurin A regulates neurogenic and inflammatory transcriptional networks in goldfish (Carassius auratus) radial glia.

Nature’s Scientific Reports (2017).

2017
Jyoti Kode, Navin Khattry, Ashish Bakshi, Vasanti Amrutkar, Bhausaheb Bagal, Rohini Karandikar, Pallavi Rane, Nobutaka Fujii, Shubhada Chiplunkar. Study of stem cell homing & self-renewal marker gene profile of ex vivo expanded human CD34+ cells manipulated with a mixture of cytokines & stromal cell-derived factor 1.

Indian Journal of Medical Research (2017).

2017
Tarique Anwar, Bijoya Sen, Savera Aggarwal, Rhisita Nath, Ajay Katoch, Mohamed Aiyaz, Nirupma Trehanpati, Sanjeev Khosla, Gayatri Ramakrishnan. Differentially regulated gene expression in quiescence vs. senescence and identification of ARID5A as a quiescence associated marker.

Journal of Cellular physiology (2017).

2017
Rama Chandra Laha, Surajit De Mandal, Lalhmanghai Ralte, Laldinfeli Ralte, Nachimuthu Senthil Kumar, Guruswami Gurusubramanian, Ramalingam Satishkumar, Raja Mugasimangalam and Nagesh Aswathnarayana Kuravadi. Correction to: Meta-barcoding in combination with palynological inference is a potent diagnostic marker for honey floral composition.

 AMB Express (2017)

2017
Susheel Kumar Singh, Sunita Singh Dhawan. Analyzing trichomes and spatio-temporal expression of a cysteine protease gene Mucunain in Mucuna pruriens L.

(DC). Protoplasma (2017).

2017
Kuppusamy Sivasankaran, Pratheesh Mathew, Sekar Anand, Stanislaus Antony Ceasar, Soosaimanikam Mariapackiam, Savarimuthu Ignacimuthu. Complete mitochondrial genome sequence of fruit-piercing moth Eudocima phalonia (Linnaeus, 1763) (Lepidoptera: Noctuoidea).

Genomics Data (2017).

2017
Tapan Kumar Mondal, Hukam Chand Rawal, Kishor Gaikwad, Tilak Raj Sharma, Nagendra Kumar Singh. First de novo draft genome sequence of Oryza coarctata, the only halophytic species in the genus Oryza.

2017
Udita Chandra, Aarti Yadav, Devanand Kumar, Swati Saha. Cell cycle stage-specific transcriptional activation of cyclins mediated by HAT2- dependant H4K10 acetylation of promoters in Leishmania donovani.

PLoS Pathog (2017).

2017
Gursharan Kaur, Vineet Kumar, Amit Arora, Ajay Tomar, Ashish, Runa Sur & Dipak Dutta. Affected energy metabolism under manganese stress governs cellular toxicity.

 Natures Scientific Reports (2017).

2017
Surender Kumar, BL Subbarao & Vipin Hallan. Molecular characterization of emaraviruses associated with Pigeonpea sterility mosaic disease.

Natures Scientific Reports (2017).

2017
Nizar Haddad, Noureddine Adjlane, Wahida Loucif-Ayad, Abhinandita Dash, S. Naganeeswaran, Balaji Rajashekar, Kosai Ali Ahmed Al-Nakeeb, Thomas Sicheritz-Pontén. Mitochondrial genome of the North African Sahara Honeybee, Apis mellifera sahariensis (Hymenoptera: Apidae).

Mitochondrial Dna Part B (2017).

2017
Sumit Kumar, Rachapudi Venkata Sreeharsha, Shalini Mudalkar, Prasad M. Sarashetti & Attipalli Ramachandra Reddy. Molecular insights into photosynthesis and carbohydrate metabolism in Jatropha curcas grown under elevated CO2 using transcriptome sequencing and assembly.

 Natures Scientific Reports (2017).

2017
2016
Hickman, Oliver J, Smith, Richard A, Dasgupta, Prokar, Rao, Sudha Narayana, Nayak, Soumya, Sreenivasan, Shubha, Vyakarnam, Annapurna, Galustian, Christine, Expression of two WFDC1/ps20 isoforms in prostate stromal cells induces paracrine apoptosis through regulation of PTGS2/COX-2, British Journal Of Cancer, Volume 114, Page 1235, 10.1038/bjc.2016.91

Volume 114, Page 1235, 10.1038/bjc.2016.91

2016
Choubey, A. & Rajam, M.V. (2016) Transcriptome response and developmental implications of RNAi-mediated ODC knockdown in tobacco.

Funct Integr Genomics. pp 1-14.

2016
Tellapragada C, Kamthan A, Shaw T, KEV, KumarS, Bhat V, et al. (2016) Unravelling the Molecular Epidemiology and Genetic Diversity among Burkholderia pseudomallei Isolates from South India Using Multi Locus Sequence Typing. PLoS ONE 11(12):e0168331.doi:10.1371/journal.pone.0168331

PLoS ONE 11(12):e0168331.doi:10.1371/journal.pone.0168331

2016
Pandey SS, Patnana PK, Lomada SK, Tomar A, Chatterjee S (2016) Co-regulation of Iron Metabolism and Virulence Associated Functions by Iron and XibR, a Novel Iron Binding Transcription Factor, in the Plant Pathogen Xanthomonas.

PLoS Pathog 12(11): e1006019. doi:10.1371 /journal. ppat.1006019.

2015
Jees Sebastian, Sharmada Swaminath, Rashmi Ravindran Nair, Kishor Jakkala, Atul Pradhan and Parthasarathi Ajitkumar. (2016) De Novo Emergence of Genetically Resistant Mutants of Mycobacterium tuberculosis from the Persistence Phase Cells formed against Antituberculosis Drugs In Vitro.

 Antimicrob. Agents Chemother. AAC.01343-16.

2016
Megha H. Sampangi-Ramaiah, Kundapura V. Ravishankar, Ajitha Rekha, Kodathalu Seetharamaiah Shivashankara, laxman R. Hunashikatti. A Contig-Based Computational Prediction of Conserved miRNAs and Their Probable Role in Regulation of Cuticular Wax Biosynthesis in Banana.

Plant Mol Biol Rep (2016)

2016
Deepak Kumar, Saptarshi Hazra, Riddhi Datta & Sharmila Chattopadhyay. Transcriptome analysis of Arabidopsis mutants suggests a crosstalk between ABA, ethylene and GSH against combined cold and osmotic stress.

Scientific Reports 6, Article number: 36867; (2016).

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Das P, Bansal A, Rao SN, Deodhar K, Mahantshetty U, Shrivastava SK, et al. (2016) Somatic Variations in Cervical Cancers in Indian Patients.

PLoS ONE 11(11):e0165878.

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Muthuswamy M, Uma S, Backiyarani S, Saraswathi MS and Chandrasekar A. Transcriptomic Changes of Drought-Tolerant and Sensitive Banana Cultivars Exposed to Drought Stress.

Front. Plant Sci (2016). 7:1609

2016
Rohini Bhat Valekunja, Vikramshankar Kamakoti, Anitha Peter, Shamprasad Phadnis, Shalini Prasad and Vinay J Nagaraj. The Detection of Papaya Ringspot Virus Coat Protein Using an Electrochemical Immunosensor.

Analytical Methods (2016).

2016
Jayaraman Suriya,Mootapally Chandra Shekar, Neelam Mustakali Nathani,Thangaiyan Suganya,Subramanian Bharathiraja,Muthukalingan Krishnan. Assessment of bacterial community composition in response to uranium levels in sediment samples of sacred Cauvery River.

Applied Microbiology and Biotechnology (2016).

2016
Anirban Kundu, Sujay Paul, Amita Pal and Genotypic Technology. Mungbean Yellow Mosaic India Virus (MYMIV)-infection, Small RNA Library Construction and Deep Sequencing for MicroRNA Identification in Vigna mungo.

bio-protocol (2016).

2016
Vandana Sharma, Rajaram Purushotham and Rupinder Kaur. The phosphoinositide 3-kinase regulates retrograde trafficking of the iron permease CgFtr1 and iron homeostasis in Candida glabrata.

The Journal of Biological Chemistry (2016)

2016
Ruchishree Konhar, Devendra Kumar Biswal, Manish Debnath, Sriram Parameswaran, Durai Sundar, Pramod Tandon. Complete Chloroplast Genome Sequence of Dendrobium nobile from Northeastern India. American Society for Microbiology.

Genome Announcements; vol 4 (5) (2016).

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Akansha Pandey, Vishakha Swarnkar, Tushar Pandey, Piush Srivastava, Sanjeev Kanojiya, Dipak Kumar Mishra & Vineeta Tripathi. Transcriptome and Metabolite analysis reveal candidate genes of the cardiac glycoside biosynthetic pathway from Calotropis procera.

NATURE Scientific Reports 6, Article number: 34464 (2016)

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Pon Arunachalam Boopathi, Amit Kumar Subudhi, Sheetal Middha, Jyoti Acharya, Raja Chinnadurai Mugasimangalam, Sanjay Kumar Kochar, Dhanpat Kumar Kochar, Ashis Das. Design, Construction and Validation of a Plasmodium vivax microarray for the transcriptome profiling of clinical isolates.

Acta Tropica (2016)

2016
Srilatha Jasty, Subramanian Krishnakumar. Profiling of DNA and histone methylation reveals epigenetic-based regulation of gene expression during retinal differentiation of Stem/progenitor cells isolated from the ciliary pigment epithelium of Human cadaveric eyes.

Brain Research (2016)

2016
Anirban Roychowdhury, Sudip Samadder, Pijush Das, Sapan Mandloi, Sankar Addya, Chandraditya Chakraborty, Partha Sarathi Basu, Ranajit Mondal, Anup Roy, Saikat Chakrabarti, Susanta Roychoudhury, Chinmay Kumar Panda. Integrative genomic and network analysis identified novel genes associated with the development of advanced cervical squamous cell carcinoma.

 Biochimica et Biophysica Acta (BBA) – General Subjects (2016).

2016
Devika Ranade, Shivsmriti Koul, Joyce Thompson, Kumar Brajesh Prasad, Kundan Sengupta. Chromosomal aneuploidies induced upon Lamin B2 depletion are mislocalized in the interphase nucleus.

Chromosoma (2016).DOI 10.1007/s00412-016-0580-y

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Kaliyappan R, Viswanathan S, Suthanthiram B, Subbaraya U, Marimuthu Somasundram S, et al. (2016) Evolutionary Expansion of WRKY Gene Family in Banana and Its Expression Profile during the Infection of Root Lesion Nematode, Pratylenchus coffeae.

PLoS ONE 11(9): e0162013. doi:10.1371/journal.pone.0162013

2016
Atish Ray, Asani Bhaduri, Nidhi Srivastava, Shibnath Mazumder. Identification of novel signature genes attesting arsenic-induced immune alterations in adult zebrafish (Danio rerio).

Journal of Hazardous Materials(2017);Volume 321, Pages 121–131

2016
Ganesan S, Alex AA, Chendamarai E, Balasundaram N, Palani HK, David S, Kulkarni U, Aiyaz M, Mugasimangalam R, Korula A, Abraham A, Srivastava A, Padua RA, Chomienne C, George B, Balasubramanian P, Mathews V. Rationale and efficacy of proteasome inhibitor combined with arsenic trioxide in the treatment of acute promyelocytic

leukemia. Leukemia. 2016 Aug, Vol 18. doi: 10.1038/leu.2016.227.

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Snehal D. Karpe, Rikesh Jain, Axel Brockmann and R. Sowdhamini.Identification of complete repertoire of Apis florea odorant receptors reveals complex orthologous relationships with Apis mellifera.

Genome Biology and Evolution,2016;doi:10.1093/gbe/evw202

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Haoxin Li, Andrew Cowie, John A. Johnson, Duncan Webster, Christopher J. Martyniuk and Christopher A. Gray. Determining the mode of action of anti-mycobacterial C17 diyne natural products using expression profiling: evidence for fatty acid biosynthesis inhibition.

BMC Genomics (2016) 17:621. DOI 10.1186/s12864-016-2949-y

2016
Sujay Paul, Yolanda Cortez,Nadia Vera,Gretty K. Villena and Marcel Gutiérrez-Correa.

BBJ, 15(1): 1-11, 2016; Article no.BBJ.27519

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Pallavi Kakade, Parag Sadhale, Kaustuv Sanyal & Valakunja Nagaraja. ZCF32, a fungus specific Zn(II)2 Cys6 transcription factor, is a repressor of the biofilm development in the human pathogen Candida albicans.

Scientific Reports 6, Article number: 31124 (2016) doi:10.1038/srep31124.

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Cornelia Braicu, Sonia Selicean, Roxana Cojocneanu-Petric, Raduly Lajos, Ovidiu Balacescu, Ionelia Taranu, Daniela Eliza Marin, Monica Motiu, Ancuta Jurj, Patriciu Achimas-Cadariu and Ioana Berindan-Neagoe.Evaluation of cellular and molecular impact of zearalenone and Escherichia coli co-exposure on IPEC-1 cells using microarray technology.

BMC Genomics (2016);17:576. DOI: 10.1186/s12864-016-2830-z

2016
Josephy D. DiBattista, Xin Wang, Pablo Saenz-Agudelo, Marek J. Piatek, Manuel Aranda, Michael L Berumen.Draft genome of an iconic Red Sea reef fish, the blacktail butterflyfish (Chaetodon austriacus): current status and its characteristics.

 Molecular Ecology Resources (2016); DOI: 10.1111/1755-0998.12588

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Ashok Ganapathy, Sridhar Jayavel and Sivakumar Natesan. Draft Genome Sequence of Carotenoid Producing Yellow Pigmented Planococcus maritimus MKU009.

Journal of Genomics 2016, Vol. 4: 23-25. doi: 10.7150/jgen.15533

2016
Vairavan Lakshmanan, Dhiru Bansal, Jahnavi Kulkarni, Deepak Poduval, Srikar Krishna, Vidyanand Sasidharan, Praveen Anand, Aswin Seshasayee and Dasaradhi Palakodeti. Genome-wide analysis of polyadenylation events in Schmidtea mediterranea.

G3: Genes|Genomes|Genetics (2016)doi:10.1534/g3.116.031120

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Alok Kumar Singh, Rajeev Kumar Pandey, Chandrima Shaha & Rentala Madhubala. MicroRNA expression profiling of Leishmania donovani-infected host cells uncovers the regulatory role of MIR30A-3p in host autophagy.

Autophagy (2016)

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Amit Kumar Subudhi, P.A. Boopathi, Sheetal Middha, Jyoti Acharya, Sudha Narayana Rao, Raja C. Mugasimangalam, Paramendra Sirohi, Sanjay K. Kochar, Dhanpat K. Kochar, Ashis Das. A cross strain Plasmodium falciparum microarray optimized for the transcriptome analysis of Plasmodium falciparum patient derived isolates.

Genomics Data (2016); Vol 9, Pg 118–125

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Chakrapani, V., Patra, S.K., Mohapatra, S.D. et al. Comparative transcriptomic profiling of larvae and post-larvae of Macrobrachium rosenbergii in response to metamorphosis and salinity exposure.

Genes Genom (2016). doi:10.1007/s13258-016-0452-0

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Moiz A. Ansari1, Zeeshan Fatima1, Saif Hameed. Mechanistic insights into the mode of action of anticandidal sesamol.

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2016
Sujay Paul, Yolanda Cortez, Nadia Vera, Gretty K. Villena, Marcel Gutiérrez-Correa. Metagenomic analysis of microbial community of an Amazonian geothermal spring in Peru.

Genomics Data (2016); Vol 9, pg 63-66

2016
Jatoth Balsingh, Surabhi Radhakrishna, Kandasamy Ulaganathan.Draft Genome Sequence of Bacillus pumilus ku-bf1 Isolated from the Gut Contents of Wood Boring Mesomorphus sp.

Front. Microbiol,2016 June, doi:10.3389/fmicb.2016.01037

2016
Shilpa Sharma, Gurudutta Gangenahalli. Gene Expression Profiling of Human c-Kit Mutant D816V.

Journal of Cancer Therapy, 2016 June,Vol 7,Pg 439-454

2016
Mahendra Gaur, Aradhana Das, Rajesh Kumar Sahoo, Sujata Mohanty, Raj Kumar Joshi, Enketeswara Subudhi. Comparative transcriptome analysis of ginger variety Suprabha from two different agro-climatic zones of Odisha.

Genomics Data, 2016 September, Vol 9, Pages 42–43

2016
Mahendra Gaur,Aradhana Das,Rajesh Kumar Sahoo,Basudeba Kar,Sanghamitra Nayak,Enketeswara Subudhi.De Novo transcriptome assembly of Zingiber officinale cv. Suruchi of Odisha.

Genomics Data, 2016 September,Vol 9,Pages 87–88

2016
Naveen Prasad, Shreeharsha Tarikere, Dhanashree Khanale, Farhat Habib, LS Shashidhara.A comparative genomic analysis of targets of Hox protein Ultrabithorax amongst
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Scientific Reports, 2016, vol 6, Article number: 27885.doi:10.1038/srep27885

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Nilakshi Samaranayake, Sumadhya D. FernandoEmail author, Nilaksha F. Neththikumara, Chaturaka Rodrigo, Nadira D. Karunaweera and Vajira H. W. Dissanayake.Association of HLA class I and II genes with cutaneous leishmaniasis: a case control study from Sri Lanka and a systematic review.
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Aarti Yadav, Udita Chandra & Swati Saha. Histone acetyltransferase HAT4 modulates navigation across G2/M and re-entry into G1 in Leishmania donovani.

Nature Publishing Group. Scientific Reports, 2016 June, Vol 6

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S. Dharshinia, M. Chakravarthia, J.Ashwin Narayana, V.M. Manoj, M. Naveenarani, Ravinder Kumar, Minturam Meena, Bakshi Ram, C. Appunu. De novo sequencing and transcriptome analysis of a low temperature tolerant Saccharum spontaneum clone IND 00-1037.

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Anirvan Chatterjee, Farhan Ali, Disha Bange, Kiran Kondabagil. solation and complete genome sequencing of Mimivirus bombay, a Giant Virus in sewage of Mumbai, India.

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2016
Aleksei Krasnov, Hooman Moghadam, Thomas Larsson, Sergey Afanasyev, Turid Mørkøre. Gene expression profiling in melanised sites of Atlantic salmon fillets.

Fish & Shellfish Immunology, 2016 August, Vol 55, Pg 56-63

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Satendra Kumar Mangrauthia, Surekha Agarwal, B. Sailaja, N. Sarla, S. R. Voleti. Transcriptome Analysis of Oryza sativa (Rice) Seed Germination at High Temperature Shows Dynamics of Genome Expression Associated with Hormones Signalling and Abiotic Stress Pathways.

Tropical Plant Biol. (2016). doi:10.1007/s12042-016-9170-7

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Kushal N. Gohil, Priya S. Neurgaonkar , Aditi Paranjpe , Syed G. Dastager, Mahesh S. Dharne. Peeping into genomic architecture by re-sequencing of Ochrobactrum intermedium M86 strain during laboratory adapted conditions.

Elsevier, 2016 August, Vol 8, Pg. 72-76

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Kamaldeen Nasrin Nisha, Jayavel Sridhar, Perumal Varalakshmi and Balasubramaniem Ashokkumar Draft Genome Sequence of Paracoccus sp. MKU1, a New Bacterial Strain Isolated from an Industrial Effluent with Potential for Bioremediation.

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Rathan S. Jadav, Dharmika Kumara, Natasha Buwa, Shubhra Gangulia, Sitalakshmi R. Thampattya, Nagaraj Balasubramanian, Rashna Bhandaria. Deletion of inositol hexakisphosphate kinase 1 (IP6K1) reduces cell migration and invasion, conferring protection from aerodigestive tract
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Elsevier, 2016 August, Vol 28(8), Pg 1124–1136

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Garima Sharma, Divya Tej Sowpati, Prakruti Singh, Mehak Zahoor Khan, Rakesh Ganji, Sandeep Upadhyay, Sharmistha Banerjee, Vinay Kumar Nandicoori & Sanjeev Khosla. Genome-wide non-CpG methylation of the host genome during M. tuberculosis infection.

Scientific Reports 6, Article number: 25006 (2016) doi:10.1038/srep25006

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Oliver J Hickman, Richard A Smith, Prokar Dasgupta, Sudha Narayana Rao, Soumya Nayak, Shubha Sreenivasan, Annapurna Vyakarnam and Christine Galustian. Expression of two WFDC1/ps20 isoforms in prostate stromal cells induces paracrine apoptosis through regulation of
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Mohan A, Singh RS, Kumari M, Garg D, Upadhyay A, Ecelbarger CM, et al. (2016) Urinary Exosomal microRNA-451-5p Is a Potential Early Biomarker of Diabetic Nephropathy in Rats.

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Manjima chatterjee, Upasana Mukherjee, Narmada Ashok, Raja Das, Suvrajit Das and Radha Saraswathy. MCP polymorphism, environmental risk factors and asthma – a hospital based study in vellore.

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Hittalmani S, Mahesh HB, Mahadevaiah C, Prasannakumar MK. De novo genome assembly and annotation of rice sheath rot fungus Sarocladium oryzae reveals genes involved in Helvolic acid and Cerulenin biosynthesis pathways.

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Haddad NJ, Batainh A, Saini D, et al. Evaluation of Apis mellifera syriaca Levant region honeybee conservation using comparative genome hybridization.

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Saxena S, Saxena VK, Tomar S, Sapcota D, Gonmei G. Characterization of caecum and crop microbiota of Indian indigenous chicken targeting multiple hypervariable regions within 16s rRNA gene.

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Balachander GM, Balaji SA, Rangarajan A, Chatterjee K. Enhanced Metastatic Potential in a 3D Tissue Scaffold toward a Comprehensive in Vitro Model for Breast Cancer Metastasis.

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Kushwaha P, Khedgikar V, Sharma D, et al. MicroRNA 874-3p Exerts Skeletal Anabolic Effects Epigenetically during Weaning by Suppressing Hdac1 Expression.

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Lekha G, Gupta T, Awasthi AK, Murthy GN, Trivedy K, Ponnuvel KM. Genome wide microarray based expression profiles associated with BmNPV resistance and susceptibility in Indian silkworm races of Bombyx mori.
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Kim J, Sundaresan S, Philosoph-hadas S, Yang R, Meir S, Tucker ML. Examination of the Abscission-Associated Transcriptomes for Soybean, Tomato, and Arabidopsis Highlights the Conserved Biosynthesis of an Extensible Extracellular Matrix and Boundary Layer.

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Sathishkumar Y, Krishnaraj C, Rajagopal K, Sen D, Lee YS. High throughput de novo RNA sequencing elucidates novel responses in Penicillium chrysogenum under microgravity.
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Kamala, S.; Makeshkumar, T. Transcriptome profiling of in vitro lines propagated from corm bud tip of elephant foot yam (Amorphophallus paeoniifolius) approves complete potyviruses elimination.
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Mathan kumar R, Kaur G, Kumar N, et al. Taxonomic description and genome sequence of Salinicoccus sediminis sp. nov., a novel halotolerant bacterium isolated from marine sediment.
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Banerjee A, Ghoshal PK, Sengupta K.Novel Linkage of LMNA Single nucleotide polymorphism with Dilated Cardiomyopathy in an Indian case study.
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Shekhar MS, Gomathi A, Gopikrishna G, Ponniah AG. Gene expression profiling in gill tissues of White spot syndrome virus infected black tiger shrimp Penaeus monodon by DNA microarray.
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Goodsmith N, Guo XV, Vandal OH, et al. Disruption of an M. tuberculosis Membrane Protein Causes a Magnesium-dependent Cell Division Defect and Failure to Persist in Mice.
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Mohan A, Padiadpu J, Baloni P, Chandra N. Complete Genome Sequences of a Mycobacterium smegmatis Laboratory Strain (MC2 155) and Isoniazid-Resistant (4XR1/R2) Mutant Strains.
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Malhotra V, Agrawal R,Duncan TR,Saini DK, Clark-Curtiss JE.Mycobacterium tuberculosis Response Regulators, DevR and NarL Interact In Vivo and Co-Regulate Gene Expression during Aerobic Nitrate Metabolism.
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