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PubMine
 

Purpose

PubMine was conceptualized and developed at Genotypic for mining a large set of Medline abstracts with genes and keywords of interest. PubMine searches abstracts and generates reports on gene-term relationship with citation evidences in a short time.

 

For example

  •          Data mining of diseases related to a gene X from large set of abstracts
  •          Data mining of related genes for a disease X from large set of abstracts
  •          Mapping multiple genes to multiple diseases and vice versa.

Write to genomicsatgenotypic.co.in for demo installation.

 


Input:
Huge list of abstracts downloaded from Pubmed & genes or keywords to search in the abstracts. In addition, you have an option to download the abstracts from Pubmed.

Output:
Abstract lines with your genes or keywords from the abstracts.

MedRuner or PubMine ?
Since MedRuner is a web-based application, it may not be able to handle large set of abstracts. PubMine is a standalone tool which can handle even millions of Pubmed abstracts.

 

Advantages:
  • You can analyze millions of abstracts with PubMine overnight!
  • Now finding diseases related to your genes is a simple task

Genotypic can provide literature curated data for specific keywords of interest especially gene & disease and gene & functions for extra charges. For details, please write to us at genomicsatgenotypic.co.in

 
 
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